RNA2DMap screenshot
Screenshot of RNA2DMap

Concept:

RNA2DMap is a structural interface to comparative data.

Currently, RNA2DMap presents three-dimensional RNA distances, tertiary interactions, conservation values, motifs, basepair groups, basepair conformations and coaxial stacks on interactive secondary structure models.

Credits:

RNA2DMap v2 is developed by Ame Wongsa.

RNA2DMap: A Visual Exploration Tool of the Information in RNA's Higher-Order Structure. [webpage]

Xu W., Wongsa A., Lee J., Shang L., Cannone J.J., and Gutell R.R. (2011).
RNA2DMap: A Visual Exploration Tool of the Information in RNA's Higher-Order Structure.
2011 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2011), Atlanta, GA. November 12-15, 2011. pp. 613-617.

Requirements:

Adobe Flash Player (version 10+)

Previous Versions:

RNA2DMap v1 developed by Ame Wongsa. Comparative RNA Web (CRW): Structure by Lee J.C., Cannone J.J., Wongsa A., Ozer S., Gardner D.P. and Gutell R.R. (unpublished).

RNAMap: RNA Secondary Structure Mapping Applet v0.9 by Wyles J.C., Gandhi N.B., Cannone J.J., Lee J.C., Doshi K.J. and Gutell R.R. (unpublished).

Launch RNA2DMap v2     RNA2DMap Examples